TAP SWI/SNF_SNF2 in Boechera stricta

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SNF2_N
AP2
PHD
zf-CCCH
HMG_box
Myb_DNA-binding

(Domain names are clickable)



List of proteins (41)

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namename additionClick button to show/hide sequence: Download sequence?
Bostr.0556s0036.1.ppacid=30663446 transcript=Bostr.0556s0036.1 locus=Bostr.0556s0036 ID=Bostr.0556s0036.1.v1.2 annot-version=v1.2
Bostr.0556s0650.1.ppacid=30663508 transcript=Bostr.0556s0650.1 locus=Bostr.0556s0650 ID=Bostr.0556s0650.1.v1.2 annot-version=v1.2
Bostr.0568s0094.1.ppacid=30669461 transcript=Bostr.0568s0094.1 locus=Bostr.0568s0094 ID=Bostr.0568s0094.1.v1.2 annot-version=v1.2
Bostr.0568s0409.1.ppacid=30669210 transcript=Bostr.0568s0409.1 locus=Bostr.0568s0409 ID=Bostr.0568s0409.1.v1.2 annot-version=v1.2
Bostr.0697s0040.1.ppacid=30678822 transcript=Bostr.0697s0040.1 locus=Bostr.0697s0040 ID=Bostr.0697s0040.1.v1.2 annot-version=v1.2
Bostr.0697s0057.1.ppacid=30678725 transcript=Bostr.0697s0057.1 locus=Bostr.0697s0057 ID=Bostr.0697s0057.1.v1.2 annot-version=v1.2
Bostr.10040s0085.1.ppacid=30670124 transcript=Bostr.10040s0085.1 locus=Bostr.10040s0085 ID=Bostr.10040s0085.1.v1.2 annot-version=v1.2
Bostr.13129s0187.1.ppacid=30672781 transcript=Bostr.13129s0187.1 locus=Bostr.13129s0187 ID=Bostr.13129s0187.1.v1.2 annot-version=v1.2
Bostr.13129s0452.1.ppacid=30673092 transcript=Bostr.13129s0452.1 locus=Bostr.13129s0452 ID=Bostr.13129s0452.1.v1.2 annot-version=v1.2
Bostr.13671s0363.1.ppacid=30670216 transcript=Bostr.13671s0363.1 locus=Bostr.13671s0363 ID=Bostr.13671s0363.1.v1.2 annot-version=v1.2
Bostr.15654s0002.1.ppacid=30680330 transcript=Bostr.15654s0002.1 locus=Bostr.15654s0002 ID=Bostr.15654s0002.1.v1.2 annot-version=v1.2
Bostr.15774s0007.1.ppacid=30666094 transcript=Bostr.15774s0007.1 locus=Bostr.15774s0007 ID=Bostr.15774s0007.1.v1.2 annot-version=v1.2
Bostr.18351s0103.1.ppacid=30676860 transcript=Bostr.18351s0103.1 locus=Bostr.18351s0103 ID=Bostr.18351s0103.1.v1.2 annot-version=v1.2
Bostr.18351s0342.1.ppacid=30676392 transcript=Bostr.18351s0342.1 locus=Bostr.18351s0342 ID=Bostr.18351s0342.1.v1.2 annot-version=v1.2
Bostr.19424s0190.1.ppacid=30661545 transcript=Bostr.19424s0190.1 locus=Bostr.19424s0190 ID=Bostr.19424s0190.1.v1.2 annot-version=v1.2
Bostr.19424s0662.1.ppacid=30661033 transcript=Bostr.19424s0662.1 locus=Bostr.19424s0662 ID=Bostr.19424s0662.1.v1.2 annot-version=v1.2
Bostr.19424s0740.1.ppacid=30661367 transcript=Bostr.19424s0740.1 locus=Bostr.19424s0740 ID=Bostr.19424s0740.1.v1.2 annot-version=v1.2
Bostr.20505s0015.1.ppacid=30674488 transcript=Bostr.20505s0015.1 locus=Bostr.20505s0015 ID=Bostr.20505s0015.1.v1.2 annot-version=v1.2
Bostr.22728s0001.1.ppacid=30653651 transcript=Bostr.22728s0001.1 locus=Bostr.22728s0001 ID=Bostr.22728s0001.1.v1.2 annot-version=v1.2
Bostr.23379s0001.1.ppacid=30673301 transcript=Bostr.23379s0001.1 locus=Bostr.23379s0001 ID=Bostr.23379s0001.1.v1.2 annot-version=v1.2
Bostr.25219s0084.1.ppacid=30671624 transcript=Bostr.25219s0084.1 locus=Bostr.25219s0084 ID=Bostr.25219s0084.1.v1.2 annot-version=v1.2
Bostr.25219s0422.1.ppacid=30671762 transcript=Bostr.25219s0422.1 locus=Bostr.25219s0422 ID=Bostr.25219s0422.1.v1.2 annot-version=v1.2
Bostr.25219s0459.1.ppacid=30671816 transcript=Bostr.25219s0459.1 locus=Bostr.25219s0459 ID=Bostr.25219s0459.1.v1.2 annot-version=v1.2
Bostr.2570s0020.1.ppacid=30666387 transcript=Bostr.2570s0020.1 locus=Bostr.2570s0020 ID=Bostr.2570s0020.1.v1.2 annot-version=v1.2
Bostr.2570s0059.1.ppacid=30666486 transcript=Bostr.2570s0059.1 locus=Bostr.2570s0059 ID=Bostr.2570s0059.1.v1.2 annot-version=v1.2
Bostr.25993s0168.1.ppacid=30667607 transcript=Bostr.25993s0168.1 locus=Bostr.25993s0168 ID=Bostr.25993s0168.1.v1.2 annot-version=v1.2
Bostr.25993s0274.1.ppacid=30667393 transcript=Bostr.25993s0274.1 locus=Bostr.25993s0274 ID=Bostr.25993s0274.1.v1.2 annot-version=v1.2
Bostr.2625s0001.1.ppacid=30670734 transcript=Bostr.2625s0001.1 locus=Bostr.2625s0001 ID=Bostr.2625s0001.1.v1.2 annot-version=v1.2
Bostr.26527s0004.1.ppacid=30654186 transcript=Bostr.26527s0004.1 locus=Bostr.26527s0004 ID=Bostr.26527s0004.1.v1.2 annot-version=v1.2
Bostr.26527s0158.1.ppacid=30654265 transcript=Bostr.26527s0158.1 locus=Bostr.26527s0158 ID=Bostr.26527s0158.1.v1.2 annot-version=v1.2
Bostr.26527s0276.1.ppacid=30654099 transcript=Bostr.26527s0276.1 locus=Bostr.26527s0276 ID=Bostr.26527s0276.1.v1.2 annot-version=v1.2
Bostr.26527s0349.1.ppacid=30654480 transcript=Bostr.26527s0349.1 locus=Bostr.26527s0349 ID=Bostr.26527s0349.1.v1.2 annot-version=v1.2
Bostr.26675s0134.1.ppacid=30668150 transcript=Bostr.26675s0134.1 locus=Bostr.26675s0134 ID=Bostr.26675s0134.1.v1.2 annot-version=v1.2
Bostr.26675s0383.1.ppacid=30668460 transcript=Bostr.26675s0383.1 locus=Bostr.26675s0383 ID=Bostr.26675s0383.1.v1.2 annot-version=v1.2
Bostr.27991s0098.1.ppacid=30677708 transcript=Bostr.27991s0098.1 locus=Bostr.27991s0098 ID=Bostr.27991s0098.1.v1.2 annot-version=v1.2
Bostr.3148s0116.1.ppacid=30655648 transcript=Bostr.3148s0116.1 locus=Bostr.3148s0116 ID=Bostr.3148s0116.1.v1.2 annot-version=v1.2
Bostr.3640s0056.1.ppacid=30651903 transcript=Bostr.3640s0056.1 locus=Bostr.3640s0056 ID=Bostr.3640s0056.1.v1.2 annot-version=v1.2
Bostr.5022s0090.1.ppacid=30666273 transcript=Bostr.5022s0090.1 locus=Bostr.5022s0090 ID=Bostr.5022s0090.1.v1.2 annot-version=v1.2
Bostr.5022s0093.1.ppacid=30666264 transcript=Bostr.5022s0093.1 locus=Bostr.5022s0093 ID=Bostr.5022s0093.1.v1.2 annot-version=v1.2
Bostr.7867s1045.1.ppacid=30658372 transcript=Bostr.7867s1045.1 locus=Bostr.7867s1045 ID=Bostr.7867s1045.1.v1.2 annot-version=v1.2
Bostr.9345s0055.1.ppacid=30667262 transcript=Bostr.9345s0055.1 locus=Bostr.9345s0055 ID=Bostr.9345s0055.1.v1.2 annot-version=v1.2
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum